moabb.datasets.Rozado2015#
- class moabb.datasets.Rozado2015(subjects=None, sessions=None, *, return_all_modalities=False)[source]#
Bases:
BaseDataset[source]Dataset Snapshot
Rozado2015
Motor Imagery, 2 classes (left_hand vs rest)
Class Labels: left_hand, rest
Citation & Impact
- Paper DOI10.1371/journal.pone.0121262
- CitationsLoadingβ¦
- Public APICrossref | OpenAlex
HED Event TagsHED tagsSource: MOABB BIDS HED annotation mapping.
left_handSensory-eventAgent-actionrestSensory-eventExperimental-stimulusVisual-presentationRestHED tree view
Tree Β· left_hand
ββ Sensory-event β ββ Experimental-stimulus β ββ Visual-presentation ββ Agent-action ββ Imagine ββ Move ββ Left ββ HandTree Β· rest
ββ Sensory-event ββ Experimental-stimulus ββ Visual-presentation ββ Rest
Channel SummaryTotal channels32EEG32 (active)Montagebiosemi32Sampling512 HzReferenceCMS/DRLNotch / line50 HzThis diagram is automatically generated from MOABB metadata. Please consult the original publication to confirm the experimental protocol details.
Motor imagery BCI dataset with pupillometry augmentation.
Dataset from [1].
This dataset contains 32-channel EEG recorded from 30 healthy subjects (15 female, 15 male, ages 15-61, mean 38) using a BioSemi ActiveTwo system at 512 Hz. The experiment investigates a two-class motor imagery BCI (left hand grasping vs. rest) augmented with pupil diameter measurements.
Each subject performed 1 session with 2 experiments of 25 trials each (50 trials total, ~25 per class). Each experiment is loaded as a separate run.
Trial structure (12 s total):
0 s: auditory cue (βLeftβ or βNothingβ)
0-6 s: motor imagery or rest period
6 s: auditory stop cue (βStopβ)
6-12 s: micro-break
Data is stored as XDF (eXtensible Data Format) files inside two RAR archives on Harvard Dataverse. Loading requires the
pyxdflibrary (install withpip install moabb[xdf]) and a RAR extraction tool (unar,unrar, or7z).27 subjects were right-handed, 3 were left-handed.
References
[1]D. Rozado, T. Duenser, and B. Gruen, βImproving the performance of an EEG-based motor imagery brain computer interface using task evoked changes in pupil diameter,β PLoS ONE, vol. 10, no. 3, e0121262, 2015. DOI: 10.1371/journal.pone.0121262
from moabb.datasets import Rozado2015 dataset = Rozado2015() data = dataset.get_data(subjects=[1]) print(data[1])
Dataset summary
#Subj
30
#Chan
32
#Classes
2
#Trials / class
25
Trials length
6 s
Freq
512 Hz
#Sessions
1
#Runs
2
Total_trials
1550
Participants
Population: healthy
Age: 38 (range: 15-61) years
Handedness: {βrightβ: 27, βleftβ: 3}
Equipment
Amplifier: BioSemi ActiveTwo
Electrodes: active
Montage: biosemi32
Reference: CMS/DRL
Data Access
DOI: 10.1371/journal.pone.0121262
Data URL: https://doi.org/10.7910/DVN/28932
Repository: Harvard Dataverse
Experimental Protocol
Paradigm: imagery
Task type: left hand grasping imagery vs rest
Feedback: none
Stimulus: auditory cue
- __init__(subjects=None, sessions=None, *, return_all_modalities=False)[source]#
Initialize function for the BaseDataset.
- property all_subjects#
Full list of subjects available in this dataset (unfiltered).
- convert_to_bids(path=None, subjects=None, overwrite=False, format='EDF', verbose=None)[source]#
Convert the dataset to BIDS format.
Saves the raw EEG data in a BIDS-compliant directory structure. Unlike the caching mechanism (see
CacheConfig), the files produced here do not contain a processing-pipeline hash (desc-<hash>) in their names, making the output a clean, shareable BIDS dataset.- Parameters:
path (str | Path | None) β Directory under which the BIDS dataset will be written. If
Nonethe default MNE data directory is used (same default as the rest of MOABB).subjects (list of int | None) β Subject numbers to convert. If
None, all subjects insubject_listare converted.overwrite (bool) β If
True, existing BIDS files for a subject are removed before saving. Default isFalse.format (str) β The file format for the raw EEG data. Supported values are
"EDF"(default),"BrainVision", and"EEGLAB".verbose (str | None) β Verbosity level forwarded to MNE/MNE-BIDS.
- Returns:
bids_root β Path to the root of the written BIDS dataset.
- Return type:
Examples
>>> from moabb.datasets import AlexMI >>> dataset = AlexMI() >>> bids_root = dataset.convert_to_bids(path='/tmp/bids', subjects=[1])
See also
CacheConfigCache configuration for
get_data().moabb.datasets.bids_interface.get_bids_rootReturn the BIDS root path.
Notes
Added in version 1.5.
- data_path(subject, path=None, force_update=False, update_path=None, verbose=None)[source]#
Return list of XDF file paths for a subject.
Downloads the appropriate RAR archive from Harvard Dataverse and extracts it if needed.
- Parameters:
- Returns:
Paths to XDF files for this subject.
- Return type:
- download(subject_list=None, path=None, force_update=False, update_path=None, accept=False, verbose=None)[source]#
Download all data from the dataset.
This function is only useful to download all the dataset at once.
- Parameters:
subject_list (list of int | None) β List of subjects id to download, if None all subjects are downloaded.
path (None | str) β Location of where to look for the data storing location. If None, the environment variable or config parameter
MNE_DATASETS_(dataset)_PATHis used. If it doesnβt exist, the β~/mne_dataβ directory is used. If the dataset is not found under the given path, the data will be automatically downloaded to the specified folder.force_update (bool) β Force update of the dataset even if a local copy exists.
update_path (bool | None) β If True, set the MNE_DATASETS_(dataset)_PATH in mne-python config to the given path. If None, the user is prompted.
accept (bool) β Accept licence term to download the data, if any. Default: False
verbose (bool, str, int, or None) β If not None, override default verbose level (see
mne.verbose()).
- get_additional_metadata(subject: str, session: str, run: str) None | DataFrame[source]#
Load additional metadata for a specific subject, session, and run.
This method is intended to be overridden by subclasses to provide additional metadata specific to the dataset. The metadata is typically loaded from an events.tsv file or similar data source.
- get_block_repetition(paradigm, subjects, block_list, repetition_list)[source]#
Select data for all provided subjects, blocks and repetitions.
subject -> session -> run -> block -> repetition
See also
BaseDataset.get_data
- get_data(subjects=None, cache_config=None, process_pipeline=None)[source]#
Return the data corresponding to a list of subjects.
The returned data is a dictionary with the following structure:
data = {'subject_id' : {'session_id': {'run_id': run} } }
subjects are on top, then we have sessions, then runs. A sessions is a recording done in a single day, without removing the EEG cap. A session is constitued of at least one run. A run is a single contiguous recording. Some dataset break session in multiple runs.
Processing steps can optionally be applied to the data using the
*_pipelinearguments. These pipelines are applied in the following order:raw_pipeline->epochs_pipeline->array_pipeline. If a*_pipelineargument isNone, the step will be skipped. Therefore, thearray_pipelinemay either receive amne.io.Rawor amne.Epochsobject as input depending on whetherepochs_pipelineisNoneor not.- Parameters:
subjects (List of int) β List of subject number
cache_config (dict | CacheConfig) β Configuration for caching of datasets. See
CacheConfigfor details.process_pipeline (Pipeline | None) β Optional processing pipeline to apply to the data. To generate an adequate pipeline, we recommend using
moabb.utils.make_process_pipelines(). This pipeline will receivemne.io.BaseRawobjects. The steps names of this pipeline should be elements ofStepType. According to their name, the steps should either return amne.io.BaseRaw, amne.Epochs, or anumpy.ndarray(). This pipeline must be βfixedβ because it will not be trained, i.e. no call tofitwill be made.
- Returns:
data β dict containing the raw data
- Return type:
Dict
- property metadata: DatasetMetadata | None[source]#
Return structured metadata for this dataset.
Returns the DatasetMetadata object from the centralized catalog, or None if metadata is not available for this dataset.
- Returns:
The metadata object containing acquisition parameters, participant demographics, experiment details, and documentation. Returns None if no metadata is registered for this dataset.
- Return type:
DatasetMetadata | None
Examples
>>> from moabb.datasets import BNCI2014_001 >>> dataset = BNCI2014_001() >>> dataset.metadata.participants.n_subjects 9 >>> dataset.metadata.acquisition.sampling_rate 250.0