moabb.datasets.PardoGarcia2026#
- class moabb.datasets.PardoGarcia2026[source]#
Bases:
BaseDataset[source]Dataset Snapshot
PardoGarcia2026
Pre-execution, two-class hand motor-imagery EEG (pinch vs fist) from recordings that continue into cued overt execution: 10 chronic MCA stroke patients (baseline and post-rehabilitation) and 8 healthy controls, 63 BrainVision channels at 1000 Hz.
Imagery, 2 classes (pinch vs fist)
Imagery Code: PardoGarcia2026 18 subjects 1 session 63 ch (59 EEG) 1000 Hz 2 classes 1.5 s trials CC BY 4.0Class Labels: pinch, fist
Citation & Impact
- Paper DOI10.5281/zenodo.19599465
- CitationsLoading…
- Public APICrossref | OpenAlex
HED Event TagsHED tagsSource: MOABB BIDS HED annotation mapping.
pinchSensory-eventLabelfistSensory-eventLabelHED tree view
Tree · pinch
├─ Sensory-event └─ Label
Tree · fist
├─ Sensory-event └─ Label
Channel SummaryTotal channels63EEG59 (Ag/AgCl)EOG4Montage10-10Sampling1000 HzReferenceA2 (right mastoid)Notch / line50 HzThis diagram is automatically generated from MOABB metadata. Please consult the original publication to confirm the experimental protocol details.
Mu/beta motor-imagery EEG in chronic MCA stroke and healthy controls [1].
Dataset description
EEG recorded during a cued two-class hand motor-imagery task used to study mu (8-12 Hz) and beta (12-30 Hz) changes in 10 chronic middle cerebral artery (MCA) stroke patients (
PAC01-PAC10) and 8 healthy controls (C01,02,C03,CONTROL04-CONTROL08), with a 63-channel BrainVision system at 1000 Hz. Each trial shows an image of the grip to imagine, a precision pinch (pinch, code 1) or a closed fist (fist, code 2), as documented in the record filebdf_IMAGEN.txt.Patients were recorded at baseline (session
pre) and after rehabilitation (sessionpost), except patient 2 (lost to follow-up); controls havepreonly. Each session is one continuous run. The four bipolar EOG channels are typedeogand standard 10-05 template positions are attached. An auditory go-cue marker (S 11/S 22, earliest at 1.510 s) starts overt execution, so this loader maps only the image cues (S 1/S 2) and exposes 0-1.5 s, keeping one event per trial and excluding overt movement. Control recordings hold 50 trials per class, patient recordings about 70.Paper-vs-release note: the record description reports “7 right-handed healthy controls” and “a 64-channel system (10-20 international system)”, while the released files hold eight control recordings (
C01,02,C03,CONTROL04-CONTROL08) and 63 channels in their BrainVision headers (59 EEG incl.A1+ 4 EOG). The companion preprint on the same cohort describes “a 64-channel Ag/AgCl electrode cap (Electro-Cap International), following the international 10-20 system, with A2 as reference” and four ocular electrodes, sampled at 1000 Hz; the record’s “140 trials per subject” matches the patient recordings. Recordings were made at the Instituto Pluridisciplinar, Universidad Complutense de Madrid.References
[1]Pardo-Garcia, R., Ruiz-Izquierdo, M., Garcia de la Vega, M., Calvillo, R., Kontaxakis, G., Moreno, E. M., and Pozo, M. A. (2026). Mu and Beta Oscillatory Changes during a motor task following Rehabilitation in Chronic MCA Stroke: Insights from EEG. Zenodo. DOI: https://doi.org/10.5281/zenodo.19599465
from moabb.datasets import PardoGarcia2026 dataset = PardoGarcia2026() data = dataset.get_data(subjects=[1]) print(data[1])
Dataset summary
#Subj
18
#Chan
59
#Classes
2
#Trials / class
96.11
Trials length
1.5 s
Freq
1000 Hz
#Sessions
1-2
#Runs
1
Total_trials
3460
Participants
Population: mixed
Clinical population: chronic middle cerebral artery (MCA) stroke
Equipment
Amplifier: BrainVision (Brain Products GmbH)
Electrodes: Ag/AgCl
Montage: 10-10
Reference: A2 (right mastoid)
Data Access
DOI: 10.5281/zenodo.19599465
Data URL: https://doi.org/10.5281/zenodo.19599465
Repository: Zenodo
Experimental Protocol
Paradigm: imagery
Feedback: none
Stimulus: visual
Notes
Added in version 1.8.0.
- property all_subjects#
Full list of subjects available in this dataset (unfiltered).
- convert_to_bids(path=None, subjects=None, overwrite=False, format='EDF', verbose=None, generate_figures=False)[source]#
Convert the dataset to BIDS format.
Saves the raw EEG data in a BIDS-compliant directory structure. Unlike the caching mechanism (see
CacheConfig), the files produced here do not contain a processing-pipeline hash (desc-<hash>) in their names, making the output a clean, shareable BIDS dataset.- Parameters:
path (str |
Path| None) – Directory under which the BIDS dataset will be written. IfNonethe default MNE data directory is used (same default as the rest of MOABB).subjects (list of int | None) – Subject numbers to convert. If
None, all subjects insubject_listare converted.overwrite (bool) – If
True, existing BIDS files for a subject are removed before saving. Default isFalse.format (str) – The file format for the raw EEG data. Supported values are
"EDF"(default),"BrainVision", and"EEGLAB".verbose (str | None) – Verbosity level forwarded to MNE/MNE-BIDS.
generate_figures (bool) – If
True, generate interactive neural signature HTML figures in{bids_root}/derivatives/neural_signatures/. Requiresplotly(pip install moabb[interactive]). Default isFalse.
- Returns:
bids_root – Path to the root of the written BIDS dataset.
- Return type:
Examples
>>> from moabb.datasets import AlexMI >>> dataset = AlexMI() >>> bids_root = dataset.convert_to_bids(path="/tmp/bids", subjects=[1])
Notes
Use
CacheConfigto configure caching forget_data(). Usemoabb.datasets.bids_interface.get_bids_rootto get the BIDS root path.Added in version 1.5.
- data_path(subject, path=None, force_update=False, update_path=None, verbose=None)[source]#
Return one
.vhdrpath per session (prethenpost).
- download(subject_list=None, path=None, force_update=False, update_path=None, accept=False, verbose=None)[source]#
Download all data from the dataset.
This function is only useful to download all the dataset at once.
When the dataset declares a
nemar_idand the download provider is not"upstream", the files come from NEMAR’ssourcedata/– the original pre-BIDS distribution, byte-identical to what the upstream host serves. On any NEMAR failure this falls back to the dataset’s own downloader with a warning (unless the provider is pinned to"nemar"). Seesourcedata_path()andmoabb.set_download_provider().- Parameters:
subject_list (list of int | None) – List of subjects id to download, if None all subjects are downloaded. On the NEMAR path each subject is resolved through the deposit’s
sourcedata_provenance.json; deposits enriched before that manifest recorded subjects fetch the whole tree.path (None | str) – Location of where to look for the data storing location. If None, the environment variable or config parameter
MNE_DATASETS_(dataset)_PATHis used. If it doesn’t exist, the “~/mne_data” directory is used. If the dataset is not found under the given path, the data will be automatically downloaded to the specified folder.force_update (bool) – Force update of the dataset even if a local copy exists.
update_path (bool | None) – If True, set the MNE_DATASETS_(dataset)_PATH in mne-python config to the given path. If None, the user is prompted. Not used on the NEMAR path.
accept (bool) – Accept licence term to download the data, if any. Default: False. Only relevant to the dataset’s own downloader; NEMAR mirrors are already public.
verbose (bool, str, int, or None) – If not None, override default verbose level (see
mne.verbose()).
- get_additional_metadata(subject: str, session: str, run: str)[source]#
Load additional metadata for a specific subject, session, and run.
This method is intended to be overridden by subclasses to provide additional metadata specific to the dataset. The metadata is typically loaded from an events.tsv file or similar data source.
- Parameters:
- Returns:
A DataFrame containing the additional metadata if available, otherwise None.
- Return type:
None |
pandas.DataFrame
- get_block_repetition(paradigm, subjects, block_list, repetition_list)[source]#
Select data for all provided subjects, blocks and repetitions.
subject -> session -> run -> block -> repetition
See also
- get_data(subjects=None, cache_config=None, process_pipeline=None, n_jobs=1)[source]#
Return the data corresponding to a list of subjects.
The returned data is a dictionary with the following structure:
data = {"subject_id": {"session_id": {"run_id": run}}}
subjects are on top, then we have sessions, then runs. A sessions is a recording done in a single day, without removing the EEG cap. A session is constitued of at least one run. A run is a single contiguous recording. Some dataset break session in multiple runs.
Processing steps can optionally be applied to the data using the
*_pipelinearguments. These pipelines are applied in the following order:raw_pipeline->epochs_pipeline->array_pipeline. If a*_pipelineargument isNone, the step will be skipped. Therefore, thearray_pipelinemay either receive amne.io.Rawor amne.Epochsobject as input depending on whetherepochs_pipelineisNoneor not.- Parameters:
subjects (List of int) – List of subject number
cache_config (dict |
CacheConfig) – Configuration for caching of datasets. SeeCacheConfigfor details.process_pipeline (
sklearn.pipeline.Pipeline| None) – Optional processing pipeline to apply to the data. To generate an adequate pipeline, we recommend usingmoabb.make_process_pipelines(). This pipeline will receivemne.io.BaseRawobjects. The steps names of this pipeline should be elements ofStepType. According to their name, the steps should either return amne.io.BaseRaw, amne.Epochs, or anumpy.ndarray. This pipeline must be “fixed” because it will not be trained, i.e. no call tofitwill be made.n_jobs (int) – Number of jobs to run in parallel over subjects (passed to
joblib.Parallel). Default1(sequential). Per-subject processing (reading, filtering, resampling, epoching) is independent, so this gives a near-linear speedup for datasets with many subjects.
- Returns:
data – dict containing the raw data
- Return type:
Dict
- property metadata[source]#
Return structured metadata for this dataset.
Returns the DatasetMetadata object from the centralized catalog, or None if metadata is not available for this dataset.
- Returns:
The metadata object containing acquisition parameters, participant demographics, experiment details, and documentation. Returns None if no metadata is registered for this dataset.
- Return type:
DatasetMetadata| None
Examples
>>> from moabb.datasets import BNCI2014_001 >>> dataset = BNCI2014_001() >>> dataset.metadata.participants.n_subjects 9 >>> dataset.metadata.acquisition.sampling_rate 250.0
- sourcedata_path(subject=None, path=None, force_update=False, verbose=None)[source]#
Get the dataset’s original pre-BIDS distribution from NEMAR.
Where
data_path()fetches the original files from the upstream host, this fetches the copy NEMAR mirrors undersourcedata/. The files keep their upstream names, so the two are interchangeable in content – but NEMAR stays reachable when the upstream host is slow, rate-limited, behind a bot gate, or retired.- Parameters:
subject (int | str | None) – Restrict the download to one subject, resolved through the deposit’s
sourcedata_provenance.json. Deposits enriched before that manifest recorded subjects fall back to the whole tree with a warning. WhenNonethe whole tree is fetched.path (None | str) – Base path where MOABB stores datasets.
force_update (bool) – Re-fetch even when a local copy is present.
verbose (bool, str, int, or None) – If not None, override default verbose level.
- Returns:
Local path to the
sourcedatadirectory.- Return type:
- Raises:
ValueError – If the dataset declares no
nemar_id.moabb.datasets.download.NemarDownloadError – If the download fails or the deposit publishes no
sourcedata/.